Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924056.1_cds_XP_016472503.1_64733
CDS Infomation

[gene=LOC107794521] [db_xref=GeneID:107794521] [protein=FRIGIDA-like protein 3] [partial=3'] [protein_id=XP_016472503.1] [location=complement(join(<6..629,718..893,2285..4043))] [gbkey=CDS]
Sequence

ATGGAGAAGATATCTCAAGTTATGCAACAGAATGAGGTAATGAAGAAGGGTTTAAGGAAA
TTAATGTTGATGTTTATGCTGGAGTGGAAGACTTTTGAGGAGGAGTCTGATATGACCAGC
AAGTGTTTGCAAGAATGCTTCAATGAACTTGAGGTCAGGGAGAAGTACTTGACCTCAGTA
CAAGAATCGGTGGCTGAGGGCTCTAAGGAACTTGACTTGATCAGGGAATCTTTAGAGCAG
AGACGGAAAGAAGTTGAAACAAAAGAAGAGGAGTTTTGTGCATTCCAAGAAAGAGAAATC
AGGGATTTGGAATGCAAGTGGCAAGACTTCATTTTTGCCAAAAAGGGATTCGATGAAGCT
GTGAAATTGAGAGAGGAGAAGCTGATCGAGCAAGAAAAGATTGGGGAACGCCTTTTGGAG
GAAATAGGATTTGAGCATAAGCAGTTGGAGAATTTTTGCAAGTCTAGTTTTACGGAGATT
TGTATGAAGGCCAAGGAGTTTGAGGAGCTCTTGGAGAAGTTGAATAAGATTCAGAGTTTG
ATTCGCAAAGAATCAGATGTCCTTCAGTTGAAAGAGAGAAATTTCGCTGAACGAATGGAA
GAATTTCAAGTTAAGGAAAATAATTTACAGTCGACGGAGAAGGAACTTGAAATAAAAGTA
AGGAGCTTGGACACCGTGAAGAAGGAACTTAGAGAAAAGGAACATTACCTAGATTCCATT
CAGAAGGAACTAAGAGAGAAGGAAACTACTTTGGATTCTGTAAAGACGAAACTTACTATC
AAGGAAGACCACCTGACCTCAGTGAAGAAGGAACTGGAGGACAAGGACAAGGGTCTGGAT
ACAATTAAGAAGAAACTTGAACTCCGCAAGCAGGACTTGAATTTTTTCGAGGAAATACTC
CAACTAAGGGAGGGAGGGCTCAATTCTATTCAAGAGGCATATAGGCAGCGATCAGAAGAT
CTTGATTCTAGGGAGAAGAAACTGAATTTGGTTCATGGTGAGTTTCAATTAGAAAAGGAA
AAATTCCAAACAGAACAAGGATTCTTCAAGAAAAAACTGAAAGATGTAGCACTTAAAGAG
AAACAGGTTGAGGTGAAATTTAGAGAGCTTGAACAAAGAGAAAAGCACATGGAAGATCGG
TTTAAAGTGCTTGAGGATAAAATGAAGCAACTGAAAACTATTGGTAATGTCCCTAAGAAG
ACTGAGTCTATTTATTTATACAATGTAGAAGTGGAAAGAGTTGGTGCTATCTCTAGTAGT
TCTGCTGATATAAAACTTGTTGCGACAATGGACGGGAGGACTTTACAGATATTCTTAAAT
GAGCACGCAAACAAGCTAGATTCGTTGTCTGATGATGTTTTCAGGTCCCTTCAATTGTCT
CGCAACCCTGCACAGTTGGTGCTTGATGCAATGGAAGGGTTCTATCCTCCCCACTTGATG
AACGGAGATACAGAGTTTGAGGGCAGTGTTGTCAAGCATACCTGCATTTTTCTATTAGAG
CAGTTAATTAGAGTATCACCGAAGATTCAACCTATTGTGCGCAGAAGAGCAAGGAAACTT
GCGAGAGAGTGGAAGGCTAAAATGAGGGCAATGACTGGGGATCAACTAGAGATCTTGGGC
TTCTTGTATCTGTTGGCTTCTTATGGTCTGGTCTCTTCCTTTGATGCGGATGGGCTTATG
AACCTGCTGACTGTTGTTGCTGAGCATAACAAGTCAATGGAGTTGTGTCGTCTTCTTGGT
TTCACAGAGAAGATTCCTTGTTTCATCCAGAACCTCATAGCCAAGCAAAAGCATCTTGAA
GCTGTTGAATATGCTTATGCTTTTGAGCTCACAGGCCATTTCCTACCAATACCTATTCTC
AAAGACTACTTGAAACAAGTTATGCAGATTTCTGAGTGCGTTTGTATTGGAGAAACGTGC
TCAGTCAAAGAAAAGAATGAAGCCATTGAACAGAGTGTAGCTTCCATTAGAGCTGTTATC
AGATGCATTATGGATCACGAGCTTCAATCTCAATACCCGCCTTCACAGCTTGAAGAGTGT
ATAGAATCCCTCACAAGGCAGAAGGCAAATGTAACCGCATCATCTGTCATTTCTGAGGCT
CAGCTGAAACAGGTGGTATCAATTAGTCCATCTGTCCCCACTGATACCAAGGCCCTCAGC
TCTACCTCATTCTCTGGAACGGCCTCCACTTGCATGTTAGGTCATTCCGATGCTATGGCT
GCCATCCTTGTGAGCATGGGCGGAAAGAATTTGCAGAATTTTTTATACAATCATTGGAAT
GAGCAGGAGTTGTTGCGCATTGAAATATCTAGAGCTCTCAAAATGTCATGTGACTCAGGA
TTGCTTGTATTGGAAGCACTTGAAGGATTTTATCCTCCGGAACCTCATAATGAAGAAATT
TTATTTGATCGTAGTGTTATCAGGAAAAGTTGCATTCTTCTACTGGAACAGTTGATGAGG
CTCTCACCAGAGATTAAACCAAAAGCCAAACTGGAAGCACACAAGCTTGCATTTGACTGG
AAAGCAAAGATGATAGCTGAAACAGAAAACTATCTGGCA

Peptide Sequence

PEP ID

XP_016472503.1
PEP Infomation

PREDICTED: FRIGIDA-like protein 3, partial [Nicotiana tabacum]
Sequence

MEKISQVMQQNEVMKKGLRKLMLMFMLEWKTFEEESDMTSKCLQECFNELEVREKYLTSV
QESVAEGSKELDLIRESLEQRRKEVETKEEEFCAFQEREIRDLECKWQDFIFAKKGFDEA
VKLREEKLIEQEKIGERLLEEIGFEHKQLENFCKSSFTEICMKAKEFEELLEKLNKIQSL
IRKESDVLQLKERNFAERMEEFQVKENNLQSTEKELEIKVRSLDTVKKELREKEHYLDSI
QKELREKETTLDSVKTKLTIKEDHLTSVKKELEDKDKGLDTIKKKLELRKQDLNFFEEIL
QLREGGLNSIQEAYRQRSEDLDSREKKLNLVHGEFQLEKEKFQTEQGFFKKKLKDVALKE
KQVEVKFRELEQREKHMEDRFKVLEDKMKQLKTIGNVPKKTESIYLYNVEVERVGAISSS
SADIKLVATMDGRTLQIFLNEHANKLDSLSDDVFRSLQLSRNPAQLVLDAMEGFYPPHLM
NGDTEFEGSVVKHTCIFLLEQLIRVSPKIQPIVRRRARKLAREWKAKMRAMTGDQLEILG
FLYLLASYGLVSSFDADGLMNLLTVVAEHNKSMELCRLLGFTEKIPCFIQNLIAKQKHLE
AVEYAYAFELTGHFLPIPILKDYLKQVMQISECVCIGETCSVKEKNEAIEQSVASIRAVI
RCIMDHELQSQYPPSQLEECIESLTRQKANVTASSVISEAQLKQVVSISPSVPTDTKALS
STSFSGTASTCMLGHSDAMAAILVSMGGKNLQNFLYNHWNEQELLRIEISRALKMSCDSG
LLVLEALEGFYPPEPHNEEILFDRSVIRKSCILLLEQLMRLSPEIKPKAKLEAHKLAFDW
KAKMIAETENYLA

Transcript Sequence

Gene sequence data has not been registered.